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Package for neural decoding with many different machine learning techniques
https://github.com/KordingLab/Neural_Decoding
Accompanies the manuscript (
Machine learning for neural decoding
)
State space (latent variable) models with multiple interacting populations
https://github.com/lindermanlab/ssm
In particular, see this multi-population
notebook
Accompanies the manuscript (
Recurrent Switching Dynamical Systems Models for Multiple Interacting Neural Populations
)
Sparse component analysis
https://github.com/glaserlab/sca
Accompanies the manuscript (
Identifying Interpretable Latent Factors with Sparse Component Analysis
)
Please contact me if you would like code used in other manuscripts.